Paper Search (arXiv + Semantic Scholar + OpenAlex)

Aggregated search across arXiv, Semantic Scholar and OpenAlex at once. Fans out concurrently, de-duplicates the same work across corpora (by DOI or title) and re-ranks with Reciprocal Rank Fusion, so papers found by several sources rank highest. Each hit lists which `sources` found it and an `ids` map ({source: id}) you can pass to get_paper / read_paper / the citation tools. Prefer this over search_papers for a broad lookup.

Evidence-graded MEDICAL literature search (PubMed + Europe PMC). Unlike search_all (generic, ranks high-cited reviews/guidelines above trials), this filters by research type via PubMed Publication-Type tags and re-ranks by the evidence pyramid (meta-analysis / systematic review > RCT > cohort > ...), so the actual clinical trials surface first. Open-access full text is pulled from Europe PMC by PMID. `query` should be English keyword/boolean text (PubMed maps it); do natural-language/multilingua

Read a paper's full text. format='markdown' (default, body with formulas as $LaTeX$), 'html' (raw LaTeXML HTML), or 'latex' (the original LaTeX manuscript from the e-print source). arXiv only; id like 2401.01234.

Recognize a math formula from an image and return LaTeX. Provide image_url (downloaded server-side) OR image_base64. model: deepseek-ocr (default), paddleocr-vl, or texify. Returns {latex, model, elapsed_ms}.

Recognize a table from an image and return LaTeX tabular code. Provide image_url OR image_base64. model: deepseek-ocr (default), paddleocr-vl, or texify. Returns {latex, model, elapsed_ms}.

Lint a LaTeX snippet: report errors and return an auto-fixed version. Input `code` (the LaTeX source). Returns {errors, fixed_code, summary_en, summary_zh, elapsed_ms}.

Extract a PDF to clean Markdown/LaTeX text via MinerU (great for papers behind no open-access full text — give the user's PDF and get readable text back). Provide pdf_url (downloaded server-side, SSRF-guarded) OR pdf_base64. formula/table toggle math/table reconstruction. Returns {task_id, status, cached, content, chars}: a recently-seen (cached) or small PDF comes back with `content` in one call; a fresh PDF (MinerU is GPU-heavy, minutes) returns status='running' + a task_id — then call extract

Fetch the result of an extract_pdf job by task_id. Returns {task_id, status, content, chars}: `content` is the extracted text once status='done'; while still 'running' content is null — call again shortly. Results expire server-side, so fetch reasonably soon.

Semantic Scholar: bulk paper search (up to 1000 hits, sortable e.g. 'citationCount:desc' or 'publicationDate:desc', with a continuation token). Filters: fields_of_study, year (e.g. '2020-2024'), venue, publication_types, open_access_pdf.

Semantic Scholar: recommend papers similar to one paper. pool='recent' (last open corpus) or 'all-cs' (all of CS). If the 'recent' pool yields nothing (common for older papers), it automatically retries the 'all-cs' pool.

Semantic Scholar Datasets: which datasets a release contains (papers, abstracts, citations, embeddings, s2orc, tldrs…). release_id defaults to 'latest'.

OpenAlex: advanced filtered work search. Filters: from_year, to_year, is_oa (open access only), min_citations, institution_id. sort_by: relevance|newest|cited.

OpenAlex: publication-trend analytics for a query — counts grouped by year (default), or by 'institutions.id', 'authorships.author.id', 'open_access.is_oa', 'type', 'language'. Returns aggregate counts only (cheap, no rows).